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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68127769_68133046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68127769 - 68133046

Intron Length:

5278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCGGATGG

5'SS Class:

major

3'SS Sequence:

TTGTCTTCCGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCTT

U12 Branch Point Sequence:

TCTTCCCTCCCC

Flanking Amino Acid:

AAGGTALPCRRRRAGAGPRQ

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.4

54.3

45.6

Major BPS

33.6

-1

4.3

71.4

45.1

Major PPT

81.3

0.71

0.8

77.1

31.6

Minor 5ss

31.4

-2.1

3.2

38.9

46.2

Minor BPS

39.7

-0.8

3.7

66.79

Associated Gene:

Gene:

XPA

Ensembl Gene ID:

ENSAPLG00000016286

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016990

68121251 - 68133708

12458