Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68194918_68195643_R

Intron Information:

Intron Rank:

154619

Intron Class:

major

Intron Phase:

Intron Coordinates:

68194918 - 68195643

Intron Length:

726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGCTGC

5'SS Class:

major

3'SS Sequence:

ACATGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TGTCTCTGACAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

60.1

41.9

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

70.5

0.46

62.4

38.9

Minor 5ss

38.3

-1.3

41.6

45.3

Minor BPS

47.8

-0

1.8

68.37

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045686

68193917 - 68199870

5954