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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68252564_68253132_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

68252564 - 68253132

Intron Length:

569

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATTCTT

5'SS Class:

strong_major

3'SS Sequence:

AACTCCTGAAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TTGCTTTCAACT

Flanking Amino Acid:

PSRLMALLGQALKWQQHQGL

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.7

34.8

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

49.4

-0

1.1

49.3

37.5

Minor 5ss

40.2

-1.1

3.1

59.2

45.2

Minor BPS

61.1

0.43

1.5

77.08

39.6

Associated Gene:

Gene:

SMU1

Ensembl Gene ID:

ENSAPLG00000015994

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016702

68250419 - 68262806

12388