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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68268213_68269228_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68268213 - 68269228

Intron Length:

1016

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAACT

5'SS Class:

strong_major

3'SS Sequence:

GGTTCTTCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTTCCGTGACT

Flanking Amino Acid:

LDQKDHSVFTRRDEDLLLSM

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.1

1.02

0.7

87.2

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

75.2

0.57

0.9

68.7

37.3

Minor 5ss

36.1

-1.6

50.2

45.8

Minor BPS

67.3

0.63

2.1

87.04

39.2

Associated Gene:

Gene:

DNAJA1

Ensembl Gene ID:

ENSAPLG00000015760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016451

68266917 - 68273067

6151