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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68271394_68271506_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68271394 - 68271506

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGCTGTG

5'SS Class:

major

3'SS Sequence:

ATTCTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

CCATCCCTGATT

Flanking Amino Acid:

QKNVICDKCEGRGGKKGAVE

Intron Amino Acid Position:

139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

67.1

44.6

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

73.3

0.53

66.5

40.1

Minor 5ss

40.4

-1.1

3.5

57.3

47.4

Minor BPS

54.8

0.23

1.7

68.22

43.1

Associated Gene:

Gene:

DNAJA1

Ensembl Gene ID:

ENSAPLG00000015760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016451

68266917 - 68273067

6151