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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68272827_68272935_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68272827 - 68272935

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCTGGG

5'SS Class:

major

3'SS Sequence:

GTCCGTCCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTGTGT

U12 Branch Point Sequence:

CTGTCCGCGTCT

Flanking Amino Acid:

PDKNPNEGEKFKQISQAYEV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.5

0.37

1.2

45.2

Major BPS

23.4

-1.6

4.1

45.3

47.5

Major PPT

68.4

0.42

0.9

61.4

Minor 5ss

30.8

-2.2

3.4

40.1

Minor BPS

34.4

-1.1

3.7

62.72

47.7

Associated Gene:

Gene:

DNAJA1

Ensembl Gene ID:

ENSAPLG00000015760

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016451

68266917 - 68273067

6151