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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68273787_68276029_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68273787 - 68276029

Intron Length:

2243

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTCTGCCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CTTCCTTTAATC

Flanking Amino Acid:

CSKGYVTVRQIGVNPTSVDL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.8

41.1

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

0.27

62.3

32.4

Minor 5ss

51.1

0.04

2.4

67.9

43.4

Minor BPS

0.7

1.2

75.34

35.5

Associated Gene:

Gene:

APTX

Ensembl Gene ID:

ENSAPLG00000015645

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016304

68273486 - 68281478

7993