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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68290355_68291070_R


Intron Information:

Intron Rank:
31

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
68290355 - 68291070

Intron Length:
716

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTTTGTATT

5'SS Class:
major

3'SS Sequence:
ATGTGTTTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTAAT

U12 Branch Point Sequence:
CAGTTGTTAATG

Flanking Amino Acid:
LKEKASESLHDYEMPNCPEL

Intron Amino Acid Position:
1156

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.7
0.51
1.2
77.4
36.9

Major BPS
84.4
0.85
1
84
34.5

Major PPT
79.6
0.67
0.9
73.4
41.3

Minor 5ss
44.3
-0.6
2.5
58.3
40.2

Minor BPS
48
-0.2
2.1
51.21
44

Associated Gene:

Gene:
ELP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

68285643 - 68315645
30003

68285643 - 68315645
30003

68288569 - 68315645
27077