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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68300153_68300304_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
68300153 - 68300304

Intron Length:
152

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
AAG|GCAAGTATG

5'SS Class:
strong_major

3'SS Sequence:
TTGTTCATTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGTTCAT

U12 Branch Point Sequence:
CTTGTCAGAATA

Flanking Amino Acid:
LNLLYDHNPKVFLENVETFI

Intron Amino Acid Position:
763

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
99.1
1.16
0.7
90.9
28.7

Major BPS
84.8
0.86
1
85.7
34.9

Major PPT
84.5
0.78
0.8
82.2
34.1

Minor 5ss
29
-2.4
3.8
41.5
45.1

Minor BPS
47.3
-0.2
1.8
60.28
40.2

Associated Gene:

Gene:
ELP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

68285643 - 68315645
30003

68285643 - 68315645
30003

68288569 - 68315645
27077