Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68301087_68301822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68301087 - 68301822

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTATGCTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATTAT

U12 Branch Point Sequence:

GCTACAAGAAAT

Flanking Amino Acid:

VPQDTKVVLQMPRGNLETVH

Intron Amino Acid Position:

712

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

1.2

78.8

35.5

Major BPS

76.9

0.67

66.3

40.4

Major PPT

74.9

0.56

0.9

69.1

36.8

Minor 5ss

30.7

-2.2

3.1

42.2

44.4

Minor BPS

41.7

-0.5

58.7

Associated Gene:

Gene:

ELP1

Ensembl Gene ID:

ENSAPLG00000014409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045971

68285643 - 68315645

30003

ENSAPLT00000031246

68285643 - 68315645

30003

ENSAPLT00000015156

68288569 - 68315645

27077