Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68305605_68305990_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68305605 - 68305990

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGAGTA

5'SS Class:

strong_major

3'SS Sequence:

CTGTGTTTGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAA

U12 Branch Point Sequence:

AATGTCTGAACT

Flanking Amino Acid:

ADNKITVYRYGQRTVKDPAI

Intron Amino Acid Position:

455

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

0.9

31.2

Major BPS

64.4

0.36

1.2

57.3

41.7

Major PPT

68.9

0.43

69.2

41.8

Minor 5ss

28.7

-2.4

3.4

42.5

Minor BPS

62.3

0.46

1.5

76.27

Associated Gene:

Gene:

ELP1

Ensembl Gene ID:

ENSAPLG00000014409

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045971

68285643 - 68315645

30003

ENSAPLT00000031246

68285643 - 68315645

30003

ENSAPLT00000015156

68288569 - 68315645

27077