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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68309326_68310552_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
68309326 - 68310552

Intron Length:
1227

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTATTAGGT

5'SS Class:
major

3'SS Sequence:
TGTACGACTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAA

U12 Branch Point Sequence:
TTTTGTACGACT

Flanking Amino Acid:
GKQAAHRKQTEVSPTSTWDD

Intron Amino Acid Position:
186

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
63.1
0.31
1.1
55.7
41.6

Major BPS
82.2
0.8
0.8
71.9
35.8

Major PPT
68.7
0.42
1
63.4
42.7

Minor 5ss
38.8
-1.3
3.4
56.3
47.9

Minor BPS
47.1
-0.1
2.2
76.27
40.6

Associated Gene:

Gene:
ELP1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

68285643 - 68315645
30003

68285643 - 68315645
30003

68288569 - 68315645
27077