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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68317025_68317387_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

68317025 - 68317387

Intron Length:

363

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCCC

5'SS Class:

major

3'SS Sequence:

ATGGGTGAGTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TCCCTTTTCATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.8

0.33

1.3

51.8

45.5

Major BPS

100

1.24

0.5

100

Major PPT

50.2

1.2

47.4

48.7

Minor 5ss

43.6

-0.7

3.1

60.9

43.6

Minor BPS

45.8

-0.4

1.7

46.97

41.4

Associated Gene:

Gene:

TBC1D2

Ensembl Gene ID:

ENSAPLG00000028461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039416

68316878 - 68336050

19173