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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68317569_68319299_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

68317569 - 68319299

Intron Length:

1731

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGATCT

5'SS Class:

strong_major

3'SS Sequence:

TCATCATCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TAGACCTGAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

0.8

80.3

27.8

Major BPS

100

1.24

0.5

100

Major PPT

76.5

0.6

0.9

70.2

35.1

Minor 5ss

35.1

-1.7

3.1

48.3

47.4

Minor BPS

67.6

0.63

1.5

79.45

41.8

Associated Gene:

Gene:

TBC1D2

Ensembl Gene ID:

ENSAPLG00000028461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039416

68316878 - 68336050

19173

ENSAPLT00000046705

68317388 - 68337911

20524