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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68319796_68320443_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68319796 - 68320443

Intron Length:

648

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTCTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAGAT

U12 Branch Point Sequence:

TCTTCCTTCCTG

Flanking Amino Acid:

RTPSRVFTLKAISKQAMMYW

Intron Amino Acid Position:

138

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.7

0.96

0.8

81.9

31.6

Major BPS

55.2

0.13

1.2

52.5

43.3

Major PPT

75.5

0.57

0.8

73.8

36.9

Minor 5ss

33.8

-1.8

3.7

49.2

47.3

Minor BPS

42.8

-0.6

3.6

62.41

46.2

Associated Gene:

Gene:

TBC1D2

Ensembl Gene ID:

ENSAPLG00000028461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039416

68316878 - 68336050

19173

ENSAPLT00000027653

68318686 - 68337911

19226

ENSAPLT00000026749

68318686 - 68337911

19226

ENSAPLT00000018724

68317388 - 68336050

18663

ENSAPLT00000046705

68317388 - 68337911

20524