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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68321204_68322890_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68321204 - 68322890

Intron Length:

1687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

CTTCTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTGTTTTGATCT

Flanking Amino Acid:

ISLKHPWTEIQNTVYNICVS

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

69.1

35.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

85.8

0.81

0.8

83.9

31.1

Minor 5ss

35.2

-1.7

3.2

47.2

42.3

Minor BPS

49.6

0.05

1.7

67.58

43.9

Associated Gene:

Gene:

TBC1D2

Ensembl Gene ID:

ENSAPLG00000028461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039416

68316878 - 68336050

19173

ENSAPLT00000027653

68318686 - 68337911

19226

ENSAPLT00000026749

68318686 - 68337911

19226

ENSAPLT00000018724

68317388 - 68336050

18663

ENSAPLT00000046705

68317388 - 68337911

20524