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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68323846_68324992_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68323846 - 68324992

Intron Length:

1147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ACTCCTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAT

U12 Branch Point Sequence:

TGGCTTTGCACT

Flanking Amino Acid:

TLTEEVKSQKELVKLLHKAL

Intron Amino Acid Position:

338

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

81.6

0.71

0.8

72.9

36.8

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

45.5

-0.2

1.8

62.32

41.8

Associated Gene:

Gene:

TBC1D2

Ensembl Gene ID:

ENSAPLG00000028461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039416

68316878 - 68336050

19173

ENSAPLT00000027653

68318686 - 68337911

19226

ENSAPLT00000026749

68318686 - 68337911

19226

ENSAPLT00000018724

68317388 - 68336050

18663

ENSAPLT00000046705

68317388 - 68337911

20524