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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68326355_68328579_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68326355 - 68328579

Intron Length:

2225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCCATCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

CTTTTCCCATCA

Flanking Amino Acid:

AENEKALLMKCACLQARNCQ

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

70.9

36.4

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

79.7

0.67

0.8

28.3

Minor 5ss

24.6

-2.9

28.8

43.6

Minor BPS

46.3

-0.2

2.1

63.78

42.6

Associated Gene:

Gene:

TBC1D2

Ensembl Gene ID:

ENSAPLG00000028461

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039416

68316878 - 68336050

19173

ENSAPLT00000027653

68318686 - 68337911

19226

ENSAPLT00000026749

68318686 - 68337911

19226

ENSAPLT00000018724

68317388 - 68336050

18663

ENSAPLT00000046705

68317388 - 68337911

20524