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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68373477_68377470_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
68373477 - 68377470

Intron Length:
3994

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACT|GTAAGTTTC

5'SS Class:
major

3'SS Sequence:
CTCTGCCATCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATCTCAC

U12 Branch Point Sequence:
ACACGCTTATCT

Flanking Amino Acid:
VIASCSEDATVKIWDIPKHL

Intron Amino Acid Position:
107

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.5
0.62
1.1
75.6
35.1

Major BPS
76.2
0.65
0.9
77.4
26.5

Major PPT
71.4
0.48
0.9
62.1
39

Minor 5ss
47.7
-0.2
2.8
71.6
38.3

Minor BPS
48.2
-0
2
64.67
45.4

Associated Gene:

Gene:
CORO2A

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

68342010 - 68383850
41841