Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68382366_68382651_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

68382366 - 68382651

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGCACA

5'SS Class:

major

3'SS Sequence:

CCTCCCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TGAGTGCTAACC

Flanking Amino Acid:

AQEWLNGINKGPLLVSLRPG

Intron Amino Acid Position:

391

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.4

0.6

1.3

71.6

40.2

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

69.5

0.44

0.7

61.5

Minor 5ss

35.1

-1.7

2.7

41.7

44.5

Minor BPS

43.3

-0.5

2.3

56.11

42.1

Associated Gene:

Gene:

CORO2A

Ensembl Gene ID:

ENSAPLG00000014225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014832

68342010 - 68383850

41841