Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68442843_68443019_F

Intron Information:

Intron Rank:

140559

Intron Class:

major

Intron Phase:

Intron Coordinates:

68442843 - 68443019

Intron Length:

177

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGGCTC

5'SS Class:

major

3'SS Sequence:

TTTTCCTGGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTAAAAT

U12 Branch Point Sequence:

TGTGCTATGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.5

0.6

63.9

42.4

Major BPS

70.6

0.51

1.1

75.9

34.4

Major PPT

75.1

0.56

73.2

37.1

Minor 5ss

29.4

-2.4

3.3

33.6

41.9

Minor BPS

53.9

0.11

1.7

67.93

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025674

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046248

68442484 - 68443897

1414