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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68536793_68538535_F

Intron Information:

Intron Rank:
137699
Intron Class:
major
Intron Phase:
Intron Coordinates:
68536793 - 68538535
Intron Length:
1743

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TCA|GTGAGTGTG
5'SS Class:
major
3'SS Sequence:
CTTTCTTTTCCAG|T
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTTTCAT
U12 Branch Point Sequence:
TTTTCATTGATC
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
72.2
0.52
1
66.3
39.5
Major BPS
100
1.24
0.5
100
0
Major PPT
91.3
0.93
0.6
84.1
30.8
Minor 5ss
33
-1.9
3.3
45.7
43.5
Minor BPS
72.5
0.69
1.5
83.03
30

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000024155
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000040807
68536090 - 68539009
2920