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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68642585_68643118_F

Intron Information:

Intron Rank:

148466

Intron Class:

major

Intron Phase:

Intron Coordinates:

68642585 - 68643118

Intron Length:

534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGGCAT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

46.9

-0.1

1.6

57.1

49.4

Major PPT

88.3

0.86

0.7

81.3

30.7

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029934

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043760

68610781 - 68647845

37065

ENSAPLT00000032397

68601059 - 68647845

46787

ENSAPLT00000018808

68642341 - 68643591

1251