Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68717818_68727063_F

Intron Information:

Intron Rank:

146973

Intron Class:

major

Intron Phase:

Intron Coordinates:

68717818 - 68727063

Intron Length:

9246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTACCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

40.1

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

82.4

0.73

0.8

77.9

35.6

Minor 5ss

44.2

-0.6

2.8

56.7

47.6

Minor BPS

74.2

0.84

1.5

90.89

33.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029156

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027715

68716774 - 68729216

12443