Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68864329_68868401_F

Intron Information:

Intron Rank:

150228

Intron Class:

major

Intron Phase:

Intron Coordinates:

68864329 - 68868401

Intron Length:

4073

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAATCC

5'SS Class:

major

3'SS Sequence:

CTTGCTCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTGAT

U12 Branch Point Sequence:

CTTGCTCTGACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.8

36.8

Major BPS

72.4

0.56

1.2

63.1

44.4

Major PPT

72.9

0.52

68.4

37.5

Minor 5ss

37.2

-1.5

3.4

51.1

45.6

Minor BPS

52.2

0.06

1.8

66.57

40.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028452

68855300 - 68870227

14928