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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_68871472_68872280_F

Intron Information:

Intron Rank:
131033
Intron Class:
major
Intron Phase:
Intron Coordinates:
68871472 - 68872280
Intron Length:
809

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTAAGACTC
5'SS Class:
strong_major
3'SS Sequence:
TTTTCCTTTCCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTCACAC
U12 Branch Point Sequence:
CACCCATTCACC
Flanking Amino Acid:
Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
83
0.78
0.9
71.6
38.4
Major BPS
67.8
0.44
1
75
30.1
Major PPT
92.2
0.95
0.6
84.9
29.9
Minor 5ss
36.7
-1.5
3.2
48.7
41.4
Minor BPS
46.2
-0.3
2
54.05
43.4

Associated Gene:

Gene:
Ensembl Gene ID:
ENSAPLG00000020389
Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000022742
68870686 - 68874741
4056