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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6901615_6902121_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6901615 - 6902121

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTATGTGGA

5'SS Class:

major

3'SS Sequence:

CGTTCTGTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

CTGACCACAAAT

Flanking Amino Acid:

APEEAVMIGDDCRDDVGGAQ

Intron Amino Acid Position:

205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

67.1

38.3

Major BPS

71.2

0.53

70.3

31.9

Major PPT

78.7

0.65

0.9

72.5

37.6

Minor 5ss

40.6

-1.1

3.1

52.7

44.8

Minor BPS

45.8

-0.2

63.59

45.8

Associated Gene:

Gene:

HDHD2

Ensembl Gene ID:

ENSAPLG00000004974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046617

6892919 - 6904858

11940

ENSAPLT00000005137

6892923 - 6927986

35064