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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6902186_6903195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6902186 - 6903195

Intron Length:

1010

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCATTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTCAT

U12 Branch Point Sequence:

TGTTTGTTCATT

Flanking Amino Acid:

AGMRGILVRTGKYRPGEISE

Intron Amino Acid Position:

226

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

84.8

0.86

85.7

34.9

Major PPT

81.3

0.7

0.9

75.7

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

0.01

2.4

75.64

41.8

Associated Gene:

Gene:

HDHD2

Ensembl Gene ID:

ENSAPLG00000004974

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046617

6892919 - 6904858

11940

ENSAPLT00000005137

6892923 - 6927986

35064