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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6907790_6915335_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6907790 - 6915335

Intron Length:

7546

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAGAT

5'SS Class:

strong_major

3'SS Sequence:

GCTTTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

ATGCACTGAAAT

Flanking Amino Acid:

VFVLAASNLPWELDSAMLRR

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

76.9

31.6

Major BPS

0.45

57.8

Major PPT

79.7

0.67

0.9

72.9

37.4

Minor 5ss

32.2

-2

3.5

44.1

44.7

Minor BPS

49.2

0.02

1.7

67.86

41.9

Associated Gene:

Gene:

KATNAL2

Ensembl Gene ID:

ENSAPLG00000005005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043154

6906024 - 6931484

25461

ENSAPLT00000005177

6906024 - 6942635

36612