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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6917428_6919582_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6917428 - 6919582

Intron Length:

2155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

TCTCTTTAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTCTTTAAAC

Flanking Amino Acid:

WRGDSEKLVRVLFELARYHA

Intron Amino Acid Position:

340

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

84.6

33.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

76.1

0.59

0.9

73.4

34.9

Minor 5ss

-1.2

3.1

50.4

45.6

Minor BPS

75.3

0.77

1.3

79.33

Associated Gene:

Gene:

KATNAL2

Ensembl Gene ID:

ENSAPLG00000005005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043154

6906024 - 6931484

25461

ENSAPLT00000005177

6906024 - 6942635

36612