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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6920632_6921138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6920632 - 6921138

Intron Length:

507

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATAC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

AATCCCTGAATT

Flanking Amino Acid:

VKEAVVYPIRYPQLFTGILS

Intron Amino Acid Position:

279

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

72.1

34.3

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

77.8

0.63

0.9

72.5

37.8

Minor 5ss

37.8

-1.4

42.5

44.6

Minor BPS

0.61

1.4

78.69

36.8

Associated Gene:

Gene:

KATNAL2

Ensembl Gene ID:

ENSAPLG00000005005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043154

6906024 - 6931484

25461

ENSAPLT00000005177

6906024 - 6942635

36612