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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6923794_6924560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6923794 - 6924560

Intron Length:

767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTGTT

5'SS Class:

major

3'SS Sequence:

TTGTCTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAT

U12 Branch Point Sequence:

CTGACAAGAACT

Flanking Amino Acid:

NSLNWDPDPSERLLKPLSAF

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.9

0.68

79.3

34.5

Major BPS

0.75

78.6

Major PPT

78.2

0.64

83.1

32.3

Minor 5ss

40.8

-1

3.4

63.8

41.6

Minor BPS

44.9

-0.3

64.18

45.2

Associated Gene:

Gene:

KATNAL2

Ensembl Gene ID:

ENSAPLG00000005005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043154

6906024 - 6931484

25461

ENSAPLT00000005177

6906024 - 6942635

36612