Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6925258_6926014_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6925258 - 6926014

Intron Length:

757

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTCAAATG

5'SS Class:

major

3'SS Sequence:

CATTTCTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTCAT

U12 Branch Point Sequence:

CTGTTCAAAATT

Flanking Amino Acid:

KLSTKESPKQNNDSAVTSEQ

Intron Amino Acid Position:

153

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

61.1

0.26

1.2

61.1

43.4

Major BPS

83.4

0.83

0.8

83.7

25.7

Major PPT

0.67

0.7

30.4

Minor 5ss

31.7

-2.1

3.1

40.8

45.1

Minor BPS

48.5

-0

1.9

67.62

Associated Gene:

Gene:

KATNAL2

Ensembl Gene ID:

ENSAPLG00000005005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043154

6906024 - 6931484

25461

ENSAPLT00000005177

6906024 - 6942635

36612