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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6926139_6926550_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6926139 - 6926550

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

ACTTGCATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATGAA

U12 Branch Point Sequence:

GAAGATATAACT

Flanking Amino Acid:

QQLRTAGKNRRAASSSQNLP

Intron Amino Acid Position:

111

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

75.5

0.63

40.9

Major PPT

69.3

0.44

0.9

59.6

41.1

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

46.1

-0.2

1.8

61.04

Associated Gene:

Gene:

KATNAL2

Ensembl Gene ID:

ENSAPLG00000005005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043154

6906024 - 6931484

25461

ENSAPLT00000005177

6906024 - 6942635

36612