Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6928801_6929212_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6928801 - 6929212

Intron Length:

412

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTGAAATTACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

TTTTTTTGAAAT

Flanking Amino Acid:

ILILHYLMEEGYIDAANALE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.2

0.92

0.9

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

64.8

0.33

1.1

56.2

47.4

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

67.7

0.64

1.5

85.71

33.9

Associated Gene:

Gene:

KATNAL2

Ensembl Gene ID:

ENSAPLG00000005005

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043154

6906024 - 6931484

25461

ENSAPLT00000005177

6906024 - 6942635

36612