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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6948070_6956059_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6948070 - 6956059

Intron Length:

7990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGAGGAGG

5'SS Class:

major

3'SS Sequence:

CTTTTCTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAC

U12 Branch Point Sequence:

CTTCTCTTAACT

Flanking Amino Acid:

MADFEELRNMVSSFRVSE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

60.4

45.8

Major BPS

77.1

0.67

77.9

32.2

Major PPT

91.7

0.94

0.6

84.4

30.5

Minor 5ss

25.8

-2.8

2.9

22.4

37.3

Minor BPS

79.7

1.01

1.2

88.99

35.6

Associated Gene:

Gene:

PIAS2

Ensembl Gene ID:

ENSAPLG00000005190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002495

6948046 - 6976947

28902

ENSAPLT00000015500

6948046 - 7143151

195106

ENSAPLT00000005405

6948046 - 6976586

28541