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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6960380_6964678_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6960380 - 6964678

Intron Length:

4299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCTTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

ACAGTGGTAATG

Flanking Amino Acid:

KVNGKLFPLPGYAPPPKNGI

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

70.1

43.1

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

82.6

0.73

0.7

80.9

24.3

Minor 5ss

47.9

-0.2

2.8

65.4

45.7

Minor BPS

36.4

-1.1

2.4

36.91

40.2

Associated Gene:

Gene:

PIAS2

Ensembl Gene ID:

ENSAPLG00000005190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005405

6948046 - 6976586

28541

ENSAPLT00000002495

6948046 - 6976947

28902

ENSAPLT00000015500

6948046 - 7143151

195106