Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_6974985_6976403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6974985 - 6976403

Intron Length:

1419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTCAAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TCATTCTTCATT

Flanking Amino Acid:

FLSLIPVDSQYCPPMFLDSL

Intron Amino Acid Position:

563

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

73.9

0.54

70.8

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

61.1

0.43

1.7

75.74

41.7

Associated Gene:

Gene:

PIAS2

Ensembl Gene ID:

ENSAPLG00000005190

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005405

6948046 - 6976586

28541

ENSAPLT00000002495

6948046 - 6976947

28902