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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70458692_70462658_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70458692 - 70462658

Intron Length:

3967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTATTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TTTTATTTATTG

Flanking Amino Acid:

IRKGRIWMHKGQSIIPMLTG

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

88.7

0.96

0.8

36.5

Major PPT

74.1

0.54

68.9

41.1

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

57.5

0.1

1.8

67.9

40.3

Associated Gene:

Gene:

C9orf72

Ensembl Gene ID:

ENSAPLG00000004240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004378

70458206 - 70471101

12896