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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70465597_70468461_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70465597 - 70468461

Intron Length:

2865

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACACAG

5'SS Class:

major

3'SS Sequence:

CTTTTTAATGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGTTTTTGAACC

Flanking Amino Acid:

VGSSAEKVNKIVRTLCLFLT

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

62.5

43.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.4

0.73

0.9

78.2

33.8

Minor 5ss

36.9

-1.5

3.1

47.4

Minor BPS

68.1

0.55

1.4

75.57

34.4

Associated Gene:

Gene:

C9orf72

Ensembl Gene ID:

ENSAPLG00000004240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004378

70458206 - 70471101

12896

ENSAPLT00000036031

70457786 - 70471362

13577

ENSAPLT00000022255

70461778 - 70471362

9585