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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70468579_70469301_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70468579 - 70469301

Intron Length:

723

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTACA

5'SS Class:

strong_major

3'SS Sequence:

TTGACTAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTGTTTTGACT

Flanking Amino Acid:

SGLFVQGLLKDATGSFVLPF

Intron Amino Acid Position:

266

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

83.5

27.8

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

61.2

0.25

1.1

56.2

42.5

Minor 5ss

37.7

-1.4

2.7

44.2

Minor BPS

71.1

0.75

1.3

85.97

34.5

Associated Gene:

Gene:

C9orf72

Ensembl Gene ID:

ENSAPLG00000004240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036031

70457786 - 70471362

13577

ENSAPLT00000022255

70461778 - 70471362

9585

ENSAPLT00000004378

70458206 - 70471101

12896