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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70469538_70470065_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70469538 - 70470065

Intron Length:

528

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTATGTACT

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TGCTTTTTATTT

Flanking Amino Acid:

IHTDESFTPDLNVFQDILHR

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.48

1.1

71.8

37.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

92.8

0.96

0.5

93.3

15.6

Minor 5ss

-0.3

2.5

66.9

37.8

Minor BPS

57.7

0.32

1.6

71.36

40.7

Associated Gene:

Gene:

C9orf72

Ensembl Gene ID:

ENSAPLG00000004240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036031

70457786 - 70471362

13577

ENSAPLT00000022255

70461778 - 70471362

9585

ENSAPLT00000004378

70458206 - 70471101

12896