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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70470841_70470914_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70470841 - 70470914

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

TATTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TCTTTTTTTACA

Flanking Amino Acid:

LTLIKYIEDDTQKGKKPFKS

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.7

1.3

77.6

32.8

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

90.9

0.92

0.7

89.2

27.2

Minor 5ss

33.4

-1.9

3.2

39.2

39.9

Minor BPS

65.1

0.47

1.6

74.12

37.8

Associated Gene:

Gene:

C9orf72

Ensembl Gene ID:

ENSAPLG00000004240

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022255

70461778 - 70471362

9585

ENSAPLT00000004378

70458206 - 70471101

12896

ENSAPLT00000036031

70457786 - 70471362

13577