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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70499925_70502286_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

70499925 - 70502286

Intron Length:

2362

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTTACTGAT

5'SS Class:

weak_major

3'SS Sequence:

AGCAAACTACTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTCCAA

U12 Branch Point Sequence:

TTTCCAAGGAAT

Flanking Amino Acid:

KKKSQSRVIFNMNFLRKMGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.4

59.1

39.6

Major BPS

68.1

0.45

1.3

78.7

34.9

Major PPT

49.3

-0

37.9

39.1

Minor 5ss

38.8

-1.3

3.2

56.5

42.2

Minor BPS

43.6

-0.4

2.1

69.65

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031088

70499400 - 70502394

2995