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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70534274_70566688_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70534274 - 70566688

Intron Length:
32415

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGTGCA

5'SS Class:
strong_major

3'SS Sequence:
TCTCTATTCACAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTGAC

U12 Branch Point Sequence:
TCTTCTCTATTC

Flanking Amino Acid:
NNEDIFPTSVGVPFPKNFLQ

Intron Amino Acid Position:
140

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
95.6
1.07
0.7
84.1
26.6

Major BPS
71.3
0.53
1.2
63.1
44.5

Major PPT
81.4
0.71
0.8
75.9
31.5

Minor 5ss
33
-1.9
3.1
41.6
45

Minor BPS
51.2
0.02
1.9
66.35
40.1

Associated Gene:

Gene:
MOB3B

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70495128 - 70581382
86255

70533670 - 70598826
65157

70495128 - 70593111
97984

70526903 - 70593111
66209

70526903 - 70581382
54480

70495128 - 70593111
97984