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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7053804_7057272_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7053804 - 7057272

Intron Length:

3469

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

TTTTCCTTTATA

Flanking Amino Acid:

REIDSADFVFRCNLPPISEK

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

70.1

40.6

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

88.7

0.87

0.6

84.5

23.4

Minor 5ss

41.1

-1

2.8

54.5

42.5

Minor BPS

78.8

0.9

1.5

87.38

30.3

Associated Gene:

Gene:

ST8SIA5

Ensembl Gene ID:

ENSAPLG00000011069

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011547

7020594 - 7058822

38229