Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70631206_70631687_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70631206 - 70631687

Intron Length:

482

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGT|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TTTGCTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTAAA

U12 Branch Point Sequence:

TTGCTTTTAAAG

Flanking Amino Acid:

LEKPLNCDDEVYDLMRQCWR

Intron Amino Acid Position:

1071

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

74.4

36.1

Major BPS

67.6

0.44

1.2

69.9

35.3

Major PPT

77.6

0.62

78.4

33.9

Minor 5ss

-1.4

2.8

46.6

41.8

Minor BPS

58.3

0.12

1.5

61.4

40.7

Associated Gene:

Gene:

TEK

Ensembl Gene ID:

ENSAPLG00000012815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013433

70630855 - 70671380

40526