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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70631785_70632513_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
70631785 - 70632513

Intron Length:
729

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGTATG

5'SS Class:
strong_major

3'SS Sequence:
AACCCTGCTTTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTCAT

U12 Branch Point Sequence:
AATGATTAAACC

Flanking Amino Acid:
GVLLWEIVSLGGTPYCGMTC

Intron Amino Acid Position:
1039

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.5
1.12
0.7
90.9
28.7

Major BPS
84.8
0.86
1
85.7
34.9

Major PPT
62.7
0.29
0.9
58.7
37.4

Minor 5ss
39.3
-1.2
2.8
50.6
45.9

Minor BPS
47.6
-0.2
1.9
58.56
40.4

Associated Gene:

Gene:
TEK

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70630855 - 70671380
40526