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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70633238_70634551_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
70633238 - 70634551

Intron Length:
1314

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTAAGACTC

5'SS Class:
strong_major

3'SS Sequence:
AAATAATTTCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
CTTTCATGAAAT

Flanking Amino Acid:
GQEVYVKKTMGRLPVRWMAI

Intron Amino Acid Position:
1002

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
0.9
71.6
38.4

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
67.2
0.39
1.1
55.9
47.6

Minor 5ss
36.7
-1.5
3.2
48.7
41.4

Minor BPS
58.6
0.35
1.9
79.81
41.4

Associated Gene:

Gene:
TEK

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

70630855 - 70671380
40526