Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_70642266_70642657_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

70642266 - 70642657

Intron Length:

392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CATTCTTGCTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTAAT

U12 Branch Point Sequence:

GCTGGTTTAATA

Flanking Amino Acid:

AEKPFQVTVKVPPVPQYAPR

Intron Amino Acid Position:

443

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.6

0.96

0.8

77.8

Major BPS

81.8

0.79

1.1

34.5

Major PPT

74.1

0.54

0.9

72.7

37.2

Minor 5ss

30.7

-2.2

3.3

39.5

45.9

Minor BPS

49.8

-0

1.9

58.91

41.9

Associated Gene:

Gene:

TEK

Ensembl Gene ID:

ENSAPLG00000012815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013433

70630855 - 70671380

40526